If you are planning to dive into the Peruvian Amazon, you have probably come across two popular options: Iquitos and Puerto Maldonado. While both offer incredible rainforest experiences, each has its own charm for an incredible wildlife encounter. This guide breaks down the key differences to help you choose the best destination for your clients.

Puerto Maldonado: The Gateway to Comfort & Nature

Accessibility 

  • Puerto Maldonado is easily accessible by a 1h30 flight from Lima or a 1-hour flight from Cusco. This makes it ideal for travelers combining their trip to Machu Picchu or the Sacred Valley. 
  • From the airport, the city center is 10–15 minutes away by car. 
  • Most eco-lodges can be reached within 30 minutes or 3 hours by boat along the Madre de Dios or Tambopata Rivers. 

Wildlife & Ecosystem

This region is located near Tambopata National Reserve and Manu National Park, two of the most biodiverse areas on Earth.

It is home to giant river otters, colorful macaws, capybaras, caimans, frogs, sloths, howler monkeys, insects, and vibrant macaw clay licks.

It’s also famous for oxbow lakes, mahogany forests, numerous orchids, ferns, and medicinal plants, offering a high chance of spotting wildlife in their natural habitats.

Accommodation Options

Puerto Maldonado offers eco-lodges, ranging from rustic to luxury, many of them prioritizing sustainability and local community partnerships and encouraging conservation efforts.

Experiences & Activities

Travelers can enjoy canopy walkways, wildlife observation, river kayaking, cultural visits to indigenous communities, and guided jungle treks. Some highlights include:

  • Tambopata National Reserve is a biodiverse area perfect for hiking, birdwatching, and wildlife spotting 
  • Some eco-lodges provide guided jungle tours, night safaris, and river excursions.
  • Visit local communities and learn about their traditions.
  • Lake Sandoval: A stunning oxbow lake, ideal for kayaking, wildlife spotting, and admiring unique sunsets. 
  • Monkey Island: A great spot for observing different monkey species in the wild while learning their behavior.

Iquitos: The Isolated Jungle Adventure

Accessibility

  • Iquitos is in the northeastern part of Peru and can only be reached by a 2-hour flight from Lima or by boat along the Amazon River. Its remote location makes it feel like a true adventure. 
  • From the airport, the city is 15–20 minutes away, and cruise departures from the port of Nauta are approximately a 2-hour drive.
  • Most lodges are only accessible by boat, with travel times ranging from 45 minutes to 4 hours. 

Wildlife & Ecosystem

Iquitos is near the Amazon River and the Pacaya-Samiria National Reserve, one of the largest protected flooded forests in the world. Due to that, it is home to river-based wildlife, including pink river dolphins, manatees, caimans, anacondas, insects, reptiles, monkeys, capybaras, and various bird species. Also, it hosts a variety of tree species, including rubber trees, palms, orchids, and medicinal plants. 

Accommodation Options

In this region, travelers can find different options, such as:  

  • Eco-lodges: These provide immersive experiences in the rainforest, especially the opportunity to stay surrounded by water-based wildlife and flooded forest ecosystems
  • World-class river cruises offer all-inclusive experiences and comfortable facilities amid the Peruvian Amazon. 


Experiences & Activities

Iquitos is perfect for combining cultural and natural activities. Some highlights are: 

  • Navigate on luxury Amazon River cruises, which offer a comfortable way to explore remote areas and multi-day itineraries (3-7 days) led by expert naturalists, including excursions, gourmet dining, and guided wildlife encounters, with the flexibility to explore the flooded forests, waterways, and native villages accessible only by boat.
  • Visit Pacaya-Samiria National Reserve, which is ideal for hiking, birdwatching, and spotting unique wildlife. 
  • The Belen Market: A vibrant market offering exotic fruits and traditional cuisine.
  • Manatee Rescue Center focused on protecting and rehabilitating endangered Amazonian manatees.

Essential Tips for Traveling to the Peruvian Amazon

  • A visit to either Puerto Maldonado or Iquitos typically lasts about 3 to 5 days, depending on your interests and planned activities. 
  • The best time to visit the Peruvian Amazon depends on the traveler’s interests.  From May to October is the dry season, which is perfect for outdoor activities and better rainforest exploration and wildlife spotting. On the other hand, from November to April, during the rainy season, the water levels increase, making it ideal for river exploration with the opportunity to admire the vibrant flora and fauna in its splendor. 
  • Packing essentials: Lightweight and breathable clothing, long-sleeved shirts and pants, rain jacket or poncho, waterproof bag, hiking shoes, swimwear, sunscreen, a reusable water bottle, and a first aid kit. 

Each region offers something special. Puerto Maldonado is easier to reach and great for wildlife lovers, while Iquitos offers that bucket-list Amazon River vibe and luxurious cruise options. Contact us to create an unforgettable rainforest journey for your clients!

Published in March 2025